MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Shigella flexneri 19428wH2_1568

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 237

bases: 5,139,722 bps

CDS: 4,826

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 89

misc RNA:

Total features: 4,926

Total number of protein coding genes annotated/found: 4,826

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Items 21 - 40

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5015\|JADGKR010000110.1	SEQF5015_00172	NA AA	657/219	50-706	ISAs1 family transposase ISEc1
SEQF5015\|JADGKR010000086.1	SEQF5015_04571	NA AA	513/171	52-564	hypothetical protein
SEQF5015\|JADGKR010000134.1	SEQF5015_00447	NA AA	249/83	57-305	hypothetical protein
SEQF5015\|JADGKR010000093.1	SEQF5015_04757	NA AA	300/100	66-365	IS3 family transposase ISEc17
SEQF5015\|JADGKR010000054.1	SEQF5015_03762	NA AA	273/91	67-339	Major pilu subunit operon regulatory protein PapB
SEQF5015\|JADGKR010000057.1	SEQF5015_03820	NA AA	1506/502	99-1604	hypothetical protein
SEQF5015\|JADGKR010000075.1	SEQF5015_04372	NA AA	1506/502	99-1604	hypothetical protein
SEQF5015\|JADGKR010000020.1	SEQF5015_01509	NA AA	360/120	100-459	ISAs1 family transposase ISEc5
SEQF5015\|JADGKR010000087.1	SEQF5015_04574	NA AA	1320/440	101-1420	Serine protease pic autotransporter
SEQF5015\|JADGKR010000017.1	SEQF5015_00931	NA AA	798/266	115-912	Glucuronide carrier protein
SEQF5015\|JADGKR010000111.1	SEQF5015_00173	NA AA	366/122	116-481	hypothetical protein
SEQF5015\|JADGKR010000189.1	SEQF5015_01029	NA AA	246/82	119-364	hypothetical protein
SEQF5015\|JADGKR010000170.1	SEQF5015_00930	NA AA	291/97	134-424	hypothetical protein
SEQF5015\|JADGKR010000053.1	SEQF5015_03744	NA AA	768/256	147-914	hypothetical protein
SEQF5015\|JADGKR010000067.1	SEQF5015_04138	NA AA	744/248	147-890	hypothetical protein
SEQF5015\|JADGKR010000005.1	SEQF5015_03857	NA AA	291/97	168-458	hypothetical protein
SEQF5015\|JADGKR010000199.1	SEQF5015_01145	NA AA	96/32	171-266	hypothetical protein
SEQF5015\|JADGKR010000098.1	SEQF5015_04762	NA AA	378/126	175-552	hypothetical protein
SEQF5015\|JADGKR010000074.1	SEQF5015_04369	NA AA	165/55	189-353	hypothetical protein
SEQF5015\|JADGKR010000090.1	SEQF5015_04753	NA AA	981/327	195-1175	IS110 family transposase IS621

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Page last updated: July 7, 2021 08:39:35